Author:	J. Anthony Parker, MD PhD (J.A.Parker@IEEE.org )
Dates:	2008/5/19: First version 2008/5/19: Updated
Limitations:	Requires Sun's 445k jimi library for some input/output plugins. Requires the iText library for "PDF Writer" plugin. Requires QuickTime and QuickTime for Java for QuickTime plugins.
Source:	The configuration file used in this jar file is plugins.config.
Installation:	Download: tp_collection.jar, jimi.jar (from the ImageJ site), and the iText library to the plugins folder and restart ImageJ. For QuickTime input/output QuickTime and QuickTime for Java need to be installed on the system.
Description:	This collection is intended for Nuclear Medicine users who want to get a quick start on selecting plugins. A more experienced user will likely want to select his/her own set of plugins. Note the most recent date above. If it is a long time ago, there are apt to be more up-to-date versions at the primary locations listed below. If you find this collection useful and would like it updated, please let me know. The following lists the contents of tp_collection.jar. Input/Output Animated Gif Reader DICOM Rewriter DICOM Sort Excel Writer NIfTi Input/Output File/Import/NIfTI-Analyze File/Save As/Analyze (NIfTI-1) File/Save As/NIfTI-1 File/Save As/Analyze 7.5 Analyze/Tools/Coordinate Viewer Open and Save Images Using Jimi Jimi Reader Jimi Writer QuickTime QuickTime Movie Writer QuickTime Opener PDF Writer Parker Plugins Align Stacks Alignment Fusion Orthogonal View Display Reorient Stack Show Alignment To AxialTP To CoronalTP To SagitalTP TwoD HistogramTP NucMed 3D Project ... Modification Activity to Moles Compartmental Analysis Copy Pixel Size DICOM Rescale Dispose All Windows Fit Line FoutBy64 Histogram Equalization Interfile Decoder Interfile Encoder Lookup Tables Origin Preserving Crop Pixel Size Reorder Gated Slices Stack Interleaver Stacks Concatenator Slice Remover Stack Builder Stack Combiner Stack Inserter Stack Maker Stack Normalizer Stack Reverser Stack Splitter Substack Maker
See Also:	OME at LOCI - Software - Bio-Formats - ImageJ Download .jar file (http://www.loci.wisc.edu/software/loci_tools.jar) to plugins and restart. Extensive set of tools supporting input/out formats for microscopy including DICOM and compressed DICOM. From the Open Microspcopy Enviornment (OME) at the Laboratory for Optical and Computational Instrumentation (LOCI). I have not included it in installation due to the size, 7 MB. FAQ Tudor DICOM Tools This toolkit includes both a stand alone DICOM viewer and a set of ImageJ plugins which provide DICOM capabilities. The plugins come as a runable ImageJ package. Although the DICOM package is quite useful, I have not included it in the collection above because the integration is a bit complicated. MedNuc Plugin collections