Reorient Stack (Reorient3_TP)
 
Author: J. Anthony Parker, MD PhD ( J.A.Parker@IEEE.org
Dates: 2002/05/02: First version
2002/07/10: Pick point options added
2002/07/23: New view from picked points added
2004/07/10: Support for 32-bit floating data added
Source: Several source files are included in Align3TP.zip
Installation: Download Align3TP.zip, unzip, place the "Align Stacks" folder in ImageJ's plugins folder and restart ImageJ.  The Align3TP plugin will be in a folder called, "Align Stacks".
Description: Reorient3_TP is one of the ImageJ plugins in the "Align Stacks" directory.  It allows the user to reorient the current stack.  (The current stack is selected by clicking on it.)  Axial, coronal, and sagital view may not make sense prior to reorientation.  Suggestions welcome.

Display3_TP defaults to a stack orientation which goes from inferior to superior (right handed).  Install with and Arguement which contains "Left", for stacks which go from superior to inferior.  Install with an Arguement which contains "About", to show the about message.

To recompile, make sure the "Align Stacks" folder is in the ImageJ classpath, then just use ImageJ's "Compile and Run ..." option.  (Utility classes are in the package, align3tp, in the "Align Stacks" directory.)

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